Infer function from network neighbors :: Query Form

Choose GO annotation evidence code filters

The 6 default evidence codes are considered of high reliability.
For more information, read the table below.

Type your query gene(s) below (Max=1000).

Example query genes (13 genes associated with Alzheimer diesease)

2, 323, 348, 351, 642, 1636, 4353, 4846, 5328, 5663, 5664, 6653, 22976

Gene Ontology Annotation Evidence code

GO evidence code Description by Gene Ontoloty
IDA Inferred from Direct Assay
IMP Inferred from Mutant Phenotype
IGI Inferred from Genetic Interaction
IPI Inferred from Physical Interaction
IEP Inferred from Expression Pattern
TAS Traceable Author Statement
RCA Inferred from Reviewed Computational Analysis
IGC Inferred from Genomic Context
ISS Inferred from Sequence or Structural Similarity
NAS Non-traceable Author Statement
IEA Inferred from Electronic Annotation
IC Inferred by Curator

For more detailed documentation, Go to Guide to GO Evidence Codes

Evidence codes for 21 types of data sets incorporated in HumanNet

Evidence code Data set description
CE-CC Co-citation of worm gene
CE-CX Co-expression among worm genes
CE-GT Worm genetic interactions
CE-LC Literature curated worm protein physical interactions
CE-YH High-throughput yeast 2-hybrid assays among worm genes
DM-PI Fly protein physical interactions
HS-CC Co-citation of human genes
HS-CX Co-expression among human genes
HS-DC Co-occurrence of domains among human proteins
HS-GN Gene neighbourhoods of bacterial and archaeal orthologs of human genes
HS-LC Literature curated human protein physical interactions
HS-MS human protein complexes from affinity purification/mass spectrometry
HS-PG Co-inheritance of bacterial and archaeal orthologs of human genes
HS-YH High-throughput yeast 2-hybrid assays among human genes
SC-CC Co-citation of yeast genes
SC-CX Co-expression among yeast genes
SC-GT Yeast genetic interactions
SC-LC Literature curated yeast protein physical interactions
SC-MS Yeast protein complexes from affinity purification/mass spectrometry
SC-TS Yeast protein interactions inferred from tertiary structures of complexes
SC-YH High-throughput yeast 2-hybrid assays among yeast genes